Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm27331-201ENSMUST00000183705 60 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm44608-201ENSMUST00000206827 855 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm15808-201ENSMUST00000119046 604 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm16570-201ENSMUST00000161951 436 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm44364-201ENSMUST00000198368 141 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Gm45865-201ENSMUST00000211815 945 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.63□□□□□ -0.39
Urb1Q571H0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Urb1Q571H0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.62□□□□□ -0.39
Urb1Q571H0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Urb1Q571H0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.62□□□□□ -0.39
Urb1Q571H0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.62□□□□□ -0.39
Urb1Q571H0 Gm42627-201ENSMUST00000197347 224 ntBASIC12.62□□□□□ -0.39
Urb1Q571H0 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.62□□□□□ -0.39
Urb1Q571H0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.62□□□□□ -0.39
Urb1Q571H0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Urb1Q571H0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Gm8810-201ENSMUST00000172895 754 ntBASIC12.62□□□□□ -0.39
Urb1Q571H0 Proscos-202ENSMUST00000178990 666 ntBASIC12.62□□□□□ -0.39
Urb1Q571H0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Urb1Q571H0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Urb1Q571H0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.61□□□□□ -0.39
Urb1Q571H0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.61□□□□□ -0.39
Urb1Q571H0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.61□□□□□ -0.39
Urb1Q571H0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Mir7070-201ENSMUST00000183657 86 ntBASIC12.61□□□□□ -0.39
Urb1Q571H0 Gm27682-201ENSMUST00000183930 110 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms