Protein–RNA interactions for Protein: Q3V3E1

Ubash3a, Ubiquitin-associated and SH3 domain-containing protein A, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubash3aQ3V3E1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Mir698-201ENSMUST00000102164 109 ntBASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubash3aQ3V3E1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Gm43575-201ENSMUST00000196420 516 ntBASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Gm8396-201ENSMUST00000057361 823 ntBASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubash3aQ3V3E1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ubash3aQ3V3E1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm15653-201ENSMUST00000119247 907 ntBASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm8927-201ENSMUST00000181978 981 ntBASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm27618-201ENSMUST00000183671 60 ntBASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm9229-201ENSMUST00000222777 126 ntBASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm3222-201ENSMUST00000071282 990 ntBASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubash3aQ3V3E1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubash3aQ3V3E1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Ubash3aQ3V3E1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubash3aQ3V3E1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ubash3aQ3V3E1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Ubash3aQ3V3E1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms