Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm2651-201ENSMUST00000203560 838 ntBASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trim40Q3UWA4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Gm5177-201ENSMUST00000183092 997 ntBASIC12.85□□□□□ -0.35
Trim40Q3UWA4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.85□□□□□ -0.35
Trim40Q3UWA4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim40Q3UWA4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim40Q3UWA4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms