Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Gm14928-201ENSMUST00000120198 477 ntBASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Gm7063-201ENSMUST00000186840 981 ntBASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Gm44719-201ENSMUST00000206404 149 ntBASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Gm15823-201ENSMUST00000064305 670 ntBASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nlrc4Q3UP24 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Gm12485-201ENSMUST00000119641 291 ntBASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Mir6392-201ENSMUST00000184924 108 ntBASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nlrc4Q3UP24 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nlrc4Q3UP24 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms