Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm15770-201ENSMUST00000117498 584 ntBASIC11.91□□□□□ -0.5
Q3U1D9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.91□□□□□ -0.5
Q3U1D9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Q3U1D9 Gm44397-201ENSMUST00000195950 113 ntBASIC11.91□□□□□ -0.5
Q3U1D9 Gm44719-201ENSMUST00000206404 149 ntBASIC11.91□□□□□ -0.5
Q3U1D9 Gm8463-201ENSMUST00000208573 613 ntBASIC11.91□□□□□ -0.5
Q3U1D9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Q3U1D9 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.91□□□□□ -0.5
Q3U1D9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Q3U1D9 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.91□□□□□ -0.5
Q3U1D9 Gm5161-201ENSMUST00000075243 853 ntBASIC11.91□□□□□ -0.5
Q3U1D9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.91□□□□□ -0.5
Q3U1D9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Q3U1D9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Q3U1D9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q3U1D9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.9□□□□□ -0.5
Q3U1D9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.9□□□□□ -0.5
Q3U1D9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Gm42550-201ENSMUST00000201553 960 ntBASIC11.9□□□□□ -0.5
Q3U1D9 Gm7287-201ENSMUST00000205267 602 ntBASIC11.9□□□□□ -0.5
Q3U1D9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Gm24447-201ENSMUST00000083977 338 ntBASIC11.9□□□□□ -0.5
Q3U1D9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Q3U1D9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Q3U1D9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q3U1D9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Q3U1D9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Q3U1D9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Q3U1D9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Q3U1D9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.9□□□□□ -0.51
Q3U1D9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Q3U1D9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Q3U1D9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Q3U1D9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Q3U1D9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Gm13689-201ENSMUST00000119360 685 ntBASIC11.89□□□□□ -0.51
Q3U1D9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.89□□□□□ -0.51
Q3U1D9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.89□□□□□ -0.51
Q3U1D9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms