Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Q3KNL4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Q3KNL4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Q3KNL4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Q3KNL4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Q3KNL4 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.49□□□□□ -0.25
Q3KNL4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Q3KNL4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Q3KNL4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Q3KNL4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Q3KNL4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Q3KNL4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.48□□□□□ -0.25
Q3KNL4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.48□□□□□ -0.25
Q3KNL4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Gm5566-201ENSMUST00000116118 459 ntBASIC13.48□□□□□ -0.25
Q3KNL4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.48□□□□□ -0.25
Q3KNL4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.48□□□□□ -0.25
Q3KNL4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Q3KNL4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Q3KNL4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.48□□□□□ -0.25
Q3KNL4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Q3KNL4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Q3KNL4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Q3KNL4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Q3KNL4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Q3KNL4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Q3KNL4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Q3KNL4 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.47□□□□□ -0.25
Q3KNL4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Q3KNL4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.47□□□□□ -0.25
Q3KNL4 Gm14822-201ENSMUST00000122247 291 ntBASIC13.47□□□□□ -0.25
Q3KNL4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.47□□□□□ -0.25
Q3KNL4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.47□□□□□ -0.25
Q3KNL4 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.47□□□□□ -0.25
Q3KNL4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Gm43474-201ENSMUST00000196415 774 ntBASIC13.47□□□□□ -0.25
Q3KNL4 Gm2213-201ENSMUST00000197485 688 ntBASIC13.47□□□□□ -0.25
Q3KNL4 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.47□□□□□ -0.25
Q3KNL4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Q3KNL4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Q3KNL4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Q3KNL4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Q3KNL4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Q3KNL4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Gm24513-201ENSMUST00000174964 138 ntBASIC13.46□□□□□ -0.25
Q3KNL4 Gm27397-201ENSMUST00000184997 107 ntBASIC13.46□□□□□ -0.25
Q3KNL4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.46□□□□□ -0.25
Q3KNL4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.46□□□□□ -0.25
Q3KNL4 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.46□□□□□ -0.25
Q3KNL4 Dupd1-202ENSMUST00000224735 548 ntBASIC13.46□□□□□ -0.25
Q3KNL4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms