Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ptchd3Q0EEE2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Mir1895-201ENSMUST00000122615 79 ntBASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ptchd3Q0EEE2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Gm18041-201ENSMUST00000218210 618 ntBASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ptchd3Q0EEE2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Gm2810-201ENSMUST00000118681 990 ntBASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms