Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Col9a2Q07643 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.82□□□□□ -0.04
Col9a2Q07643 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Col9a2Q07643 AY702102-202ENSMUST00000194651 1173 ntBASIC14.82□□□□□ -0.04
Col9a2Q07643 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.82□□□□□ -0.04
Col9a2Q07643 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col9a2Q07643 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm5687-201ENSMUST00000118252 640 ntBASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm16177-201ENSMUST00000120728 718 ntBASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm6152-201ENSMUST00000151704 340 ntBASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm26315-201ENSMUST00000083890 321 ntBASIC14.81□□□□□ -0.04
Col9a2Q07643 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.81□□□□□ -0.04
Col9a2Q07643 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col9a2Q07643 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.8□□□□□ -0.04
Col9a2Q07643 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.8□□□□□ -0.04
Col9a2Q07643 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col9a2Q07643 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.8□□□□□ -0.04
Col9a2Q07643 Gm12957-201ENSMUST00000117835 377 ntBASIC14.8□□□□□ -0.04
Col9a2Q07643 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.8□□□□□ -0.04
Col9a2Q07643 Gm22331-201ENSMUST00000158066 136 ntBASIC14.8□□□□□ -0.04
Col9a2Q07643 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.8□□□□□ -0.04
Col9a2Q07643 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.8□□□□□ -0.04
Col9a2Q07643 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.8□□□□□ -0.04
Col9a2Q07643 Gm18473-201ENSMUST00000220543 868 ntBASIC14.8□□□□□ -0.04
Col9a2Q07643 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.8□□□□□ -0.04
Col9a2Q07643 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms