Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Col9a1Q05722 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a1Q05722 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.48□□□□□ -0.25
Col9a1Q05722 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.47□□□□□ -0.25
Col9a1Q05722 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.47□□□□□ -0.25
Col9a1Q05722 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.47□□□□□ -0.25
Col9a1Q05722 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.47□□□□□ -0.25
Col9a1Q05722 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.47□□□□□ -0.25
Col9a1Q05722 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.47□□□□□ -0.25
Col9a1Q05722 Gm12036-201ENSMUST00000120008 530 ntBASIC13.47□□□□□ -0.25
Col9a1Q05722 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Gm9358-201ENSMUST00000183067 927 ntBASIC13.47□□□□□ -0.25
Col9a1Q05722 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Col9a1Q05722 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Col9a1Q05722 AC158388.1-201ENSMUST00000225441 256 ntBASIC13.47□□□□□ -0.25
Col9a1Q05722 Itm2b-204ENSMUST00000228637 783 ntBASIC13.47□□□□□ -0.25
Col9a1Q05722 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC13.47□□□□□ -0.25
Col9a1Q05722 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col9a1Q05722 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col9a1Q05722 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Col9a1Q05722 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a1Q05722 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm43052-201ENSMUST00000201451 1628 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col9a1Q05722 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm6630-201ENSMUST00000119199 454 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm8492-201ENSMUST00000182375 987 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm37905-201ENSMUST00000195310 341 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm45276-201ENSMUST00000209549 1086 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC13.46□□□□□ -0.25
Col9a1Q05722 AC118006.2-201ENSMUST00000224167 962 ntBASIC13.46□□□□□ -0.25
Col9a1Q05722 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col9a1Q05722 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a1Q05722 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Col9a1Q05722 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a1Q05722 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms