Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sox9Q04887 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox9Q04887 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.12□□□□□ -0.15
Sox9Q04887 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox9Q04887 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox9Q04887 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.12□□□□□ -0.15
Sox9Q04887 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox9Q04887 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.12□□□□□ -0.15
Sox9Q04887 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox9Q04887 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox9Q04887 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox9Q04887 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Sox9Q04887 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Sox9Q04887 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Sox9Q04887 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.11□□□□□ -0.15
Sox9Q04887 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox9Q04887 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Sox9Q04887 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox9Q04887 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.11□□□□□ -0.15
Sox9Q04887 Gm19208-201ENSMUST00000213861 912 ntBASIC14.11□□□□□ -0.15
Sox9Q04887 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox9Q04887 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox9Q04887 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox9Q04887 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox9Q04887 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox9Q04887 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sox9Q04887 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox9Q04887 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Sox9Q04887 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Sox9Q04887 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.1□□□□□ -0.15
Sox9Q04887 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox9Q04887 Mir7032-201ENSMUST00000185154 79 ntBASIC14.1□□□□□ -0.15
Sox9Q04887 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox9Q04887 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.1□□□□□ -0.15
Sox9Q04887 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.1□□□□□ -0.15
Sox9Q04887 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sox9Q04887 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox9Q04887 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sox9Q04887 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.1□□□□□ -0.15
Sox9Q04887 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sox9Q04887 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox9Q04887 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.1□□□□□ -0.15
Sox9Q04887 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
Sox9Q04887 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sox9Q04887 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox9Q04887 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Sox9Q04887 Gm12566-201ENSMUST00000121479 359 ntBASIC14.09□□□□□ -0.15
Sox9Q04887 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Sox9Q04887 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox9Q04887 Gm8099-201ENSMUST00000200510 742 ntBASIC14.09□□□□□ -0.15
Sox9Q04887 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Sox9Q04887 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.09□□□□□ -0.15
Sox9Q04887 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.09□□□□□ -0.15
Sox9Q04887 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.09□□□□□ -0.15
Sox9Q04887 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms