Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn6Q03958 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.8□□□□□ -0.2
Pfdn6Q03958 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Mir698-201ENSMUST00000102164 109 ntBASIC13.8□□□□□ -0.2
Pfdn6Q03958 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Gm3436-201ENSMUST00000179930 840 ntBASIC13.8□□□□□ -0.2
Pfdn6Q03958 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn6Q03958 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Gm12585-201ENSMUST00000117307 290 ntBASIC13.79□□□□□ -0.2
Pfdn6Q03958 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Gm12428-201ENSMUST00000119844 727 ntBASIC13.79□□□□□ -0.2
Pfdn6Q03958 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Gm44344-201ENSMUST00000200287 129 ntBASIC13.79□□□□□ -0.2
Pfdn6Q03958 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.79□□□□□ -0.2
Pfdn6Q03958 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Pfdn6Q03958 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn6Q03958 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms