Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm37666-201ENSMUST00000194110 866 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm7003-201ENSMUST00000195089 312 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm18730-201ENSMUST00000218038 343 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm13736-201ENSMUST00000119272 253 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm44651-201ENSMUST00000207343 372 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm5369-201ENSMUST00000217499 588 ntBASIC16.93■□□□□ 0.3
Cacna1sQ02789 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.93■□□□□ 0.3
Cacna1sQ02789 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.92■□□□□ 0.3
Cacna1sQ02789 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.92■□□□□ 0.3
Cacna1sQ02789 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.92■□□□□ 0.3
Cacna1sQ02789 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.92■□□□□ 0.3
Cacna1sQ02789 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cacna1sQ02789 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.91■□□□□ 0.3
Cacna1sQ02789 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Gm19353-201ENSMUST00000184561 445 ntBASIC16.91■□□□□ 0.3
Cacna1sQ02789 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Gm7600-201ENSMUST00000209657 785 ntBASIC16.91■□□□□ 0.3
Cacna1sQ02789 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Gm10752-201ENSMUST00000218348 729 ntBASIC16.91■□□□□ 0.3
Cacna1sQ02789 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Gzmn-202ENSMUST00000225535 989 ntBASIC16.91■□□□□ 0.3
Cacna1sQ02789 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
Cacna1sQ02789 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Cacna1sQ02789 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cacna1sQ02789 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms