Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Scn1bP97952 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn1bP97952 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Scn1bP97952 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn1bP97952 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn1bP97952 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.53□□□□□ -0.4
Scn1bP97952 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn1bP97952 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.53□□□□□ -0.4
Scn1bP97952 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1bP97952 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.52□□□□□ -0.4
Scn1bP97952 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scn1bP97952 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.52□□□□□ -0.4
Scn1bP97952 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.52□□□□□ -0.4
Scn1bP97952 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1bP97952 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1bP97952 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scn1bP97952 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scn1bP97952 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1bP97952 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1bP97952 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1bP97952 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.52□□□□□ -0.4
Scn1bP97952 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Scn1bP97952 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.52□□□□□ -0.4
Scn1bP97952 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Gm13036-201ENSMUST00000117799 748 ntBASIC12.52□□□□□ -0.41
Scn1bP97952 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scn1bP97952 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Mir5131-201ENSMUST00000175426 93 ntBASIC12.52□□□□□ -0.41
Scn1bP97952 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1bP97952 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1bP97952 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.52□□□□□ -0.41
Scn1bP97952 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scn1bP97952 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.52□□□□□ -0.41
Scn1bP97952 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.52□□□□□ -0.41
Scn1bP97952 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scn1bP97952 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Scn1bP97952 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1bP97952 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.51□□□□□ -0.41
Scn1bP97952 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scn1bP97952 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.51□□□□□ -0.41
Scn1bP97952 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scn1bP97952 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn1bP97952 Gm18195-201ENSMUST00000207604 706 ntBASIC12.51□□□□□ -0.41
Scn1bP97952 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.51□□□□□ -0.41
Scn1bP97952 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms