Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smarcc1P97496 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcc1P97496 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcc1P97496 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.1■□□□□ 0.33
Smarcc1P97496 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcc1P97496 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc1P97496 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.09■□□□□ 0.33
Smarcc1P97496 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.09■□□□□ 0.33
Smarcc1P97496 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc1P97496 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcc1P97496 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcc1P97496 Gm16372-201ENSMUST00000073088 450 ntBASIC17.09■□□□□ 0.33
Smarcc1P97496 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc1P97496 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.09■□□□□ 0.33
Smarcc1P97496 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.09■□□□□ 0.33
Smarcc1P97496 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarcc1P97496 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcc1P97496 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc1P97496 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcc1P97496 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.08■□□□□ 0.33
Smarcc1P97496 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc1P97496 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc1P97496 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc1P97496 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc1P97496 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc1P97496 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcc1P97496 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Gm13786-201ENSMUST00000122371 333 ntBASIC17.08■□□□□ 0.32
Smarcc1P97496 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Gm16379-201ENSMUST00000161469 348 ntBASIC17.08■□□□□ 0.32
Smarcc1P97496 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.08■□□□□ 0.32
Smarcc1P97496 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.08■□□□□ 0.32
Smarcc1P97496 Gm8762-201ENSMUST00000193486 339 ntBASIC17.08■□□□□ 0.32
Smarcc1P97496 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.08■□□□□ 0.32
Smarcc1P97496 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.08■□□□□ 0.32
Smarcc1P97496 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Smarcc1P97496 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smarcc1P97496 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Smarcc1P97496 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.08■□□□□ 0.32
Smarcc1P97496 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Smarcc1P97496 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Smarcc1P97496 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc1P97496 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.07■□□□□ 0.32
Smarcc1P97496 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Gm2991-201ENSMUST00000173338 480 ntBASIC17.07■□□□□ 0.32
Smarcc1P97496 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Gm27320-201ENSMUST00000184892 109 ntBASIC17.07■□□□□ 0.32
Smarcc1P97496 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.07■□□□□ 0.32
Smarcc1P97496 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.07■□□□□ 0.32
Smarcc1P97496 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Smarcc1P97496 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc1P97496 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms