Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm43818-201ENSMUST00000200605 466 ntBASIC12.65□□□□□ -0.38
Cacna1aP97445 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Cacna1aP97445 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.65□□□□□ -0.38
Cacna1aP97445 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cacna1aP97445 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cacna1aP97445 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cacna1aP97445 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.65□□□□□ -0.39
Cacna1aP97445 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cacna1aP97445 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Cacna1aP97445 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Cacna1aP97445 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cacna1aP97445 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 B9d1os-201ENSMUST00000137010 674 ntBASIC12.64□□□□□ -0.39
Cacna1aP97445 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Gm16505-201ENSMUST00000179981 232 ntBASIC12.64□□□□□ -0.39
Cacna1aP97445 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.64□□□□□ -0.39
Cacna1aP97445 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Mir686-201ENSMUST00000102174 109 ntBASIC12.64□□□□□ -0.39
Cacna1aP97445 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Gm12241-201ENSMUST00000118330 726 ntBASIC12.64□□□□□ -0.39
Cacna1aP97445 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cacna1aP97445 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.64□□□□□ -0.39
Cacna1aP97445 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cacna1aP97445 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.63□□□□□ -0.39
Cacna1aP97445 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.63□□□□□ -0.39
Cacna1aP97445 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.63□□□□□ -0.39
Cacna1aP97445 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.63□□□□□ -0.39
Cacna1aP97445 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.63□□□□□ -0.39
Cacna1aP97445 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.63□□□□□ -0.39
Cacna1aP97445 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.63□□□□□ -0.39
Cacna1aP97445 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.63□□□□□ -0.39
Cacna1aP97445 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.63□□□□□ -0.39
Cacna1aP97445 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cacna1aP97445 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms