Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
PrkdcP97313 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PrkdcP97313 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PrkdcP97313 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
PrkdcP97313 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PrkdcP97313 Mir671-201ENSMUST00000102432 98 ntBASIC9.09□□□□□ -0.95
PrkdcP97313 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Gm28324-201ENSMUST00000187913 264 ntBASIC9.09□□□□□ -0.95
PrkdcP97313 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Mmp14-206ENSMUST00000225641 3238 ntBASIC9.09□□□□□ -0.95
PrkdcP97313 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
PrkdcP97313 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC9.09□□□□□ -0.95
PrkdcP97313 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.09□□□□□ -0.95
PrkdcP97313 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.96
PrkdcP97313 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Gm28388-201ENSMUST00000186262 437 ntBASIC9.08□□□□□ -0.96
PrkdcP97313 Gm43610-201ENSMUST00000199117 365 ntBASIC9.08□□□□□ -0.96
PrkdcP97313 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
PrkdcP97313 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.08□□□□□ -0.96
PrkdcP97313 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
PrkdcP97313 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.08□□□□□ -0.96
PrkdcP97313 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
PrkdcP97313 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Gm23153-201ENSMUST00000175323 313 ntBASIC9.08□□□□□ -0.96
PrkdcP97313 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.08□□□□□ -0.96
PrkdcP97313 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.08□□□□□ -0.96
PrkdcP97313 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
PrkdcP97313 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
PrkdcP97313 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
PrkdcP97313 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
PrkdcP97313 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
PrkdcP97313 Gm9463-201ENSMUST00000206707 601 ntBASIC9.08□□□□□ -0.96
PrkdcP97313 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PrkdcP97313 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
PrkdcP97313 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
PrkdcP97313 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
PrkdcP97313 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
PrkdcP97313 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
PrkdcP97313 Gm13736-201ENSMUST00000119272 253 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Gm8584-201ENSMUST00000171982 758 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Mir6923-201ENSMUST00000184592 72 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.07□□□□□ -0.96
PrkdcP97313 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC9.07□□□□□ -0.96
PrkdcP97313 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
PrkdcP97313 Gm12020-201ENSMUST00000119030 2042 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
PrkdcP97313 Gm13888-201ENSMUST00000119148 422 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Gm15432-201ENSMUST00000121106 195 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.07□□□□□ -0.96
PrkdcP97313 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC9.07□□□□□ -0.96
PrkdcP97313 Gm42918-201ENSMUST00000199249 1580 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Gm9856-201ENSMUST00000217077 2578 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 Gm11801-201ENSMUST00000117807 746 ntBASIC9.07□□□□□ -0.96
PrkdcP97313 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PrkdcP97313 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms