Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trim43cP86449 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim43cP86449 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim43cP86449 Gm43094-201ENSMUST00000196549 921 ntBASIC14.91□□□□□ -0.02
Trim43cP86449 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43cP86449 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43cP86449 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim43cP86449 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim43cP86449 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Trim43cP86449 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Gm15376-201ENSMUST00000122258 783 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim43cP86449 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Gm16215-201ENSMUST00000161990 637 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 Gm6218-201ENSMUST00000219812 628 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Gm24447-201ENSMUST00000083977 338 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim43cP86449 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim43cP86449 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.9□□□□□ -0.02
Trim43cP86449 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim43cP86449 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43cP86449 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim43cP86449 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trim43cP86449 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Trim43cP86449 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43cP86449 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trim43cP86449 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43cP86449 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43cP86449 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim43cP86449 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.89□□□□□ -0.03
Trim43cP86449 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim43cP86449 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.89□□□□□ -0.03
Trim43cP86449 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim43cP86449 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim43cP86449 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trim43cP86449 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim43cP86449 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms