Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CiitaP79621 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.84□□□□□ -0.03
CiitaP79621 Gm42550-201ENSMUST00000201553 960 ntBASIC14.84□□□□□ -0.03
CiitaP79621 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CiitaP79621 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CiitaP79621 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CiitaP79621 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CiitaP79621 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CiitaP79621 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
CiitaP79621 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CiitaP79621 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CiitaP79621 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CiitaP79621 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CiitaP79621 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CiitaP79621 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.83□□□□□ -0.04
CiitaP79621 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.83□□□□□ -0.04
CiitaP79621 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CiitaP79621 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.83□□□□□ -0.04
CiitaP79621 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.83□□□□□ -0.04
CiitaP79621 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CiitaP79621 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.83□□□□□ -0.04
CiitaP79621 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
CiitaP79621 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.83□□□□□ -0.04
CiitaP79621 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CiitaP79621 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CiitaP79621 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CiitaP79621 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.82□□□□□ -0.04
CiitaP79621 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.82□□□□□ -0.04
CiitaP79621 Gm5687-201ENSMUST00000118252 640 ntBASIC14.82□□□□□ -0.04
CiitaP79621 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CiitaP79621 Gm13612-201ENSMUST00000119276 390 ntBASIC14.82□□□□□ -0.04
CiitaP79621 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.82□□□□□ -0.04
CiitaP79621 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.82□□□□□ -0.04
CiitaP79621 Gm38144-201ENSMUST00000192790 465 ntBASIC14.82□□□□□ -0.04
CiitaP79621 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.82□□□□□ -0.04
CiitaP79621 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.82□□□□□ -0.04
CiitaP79621 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.82□□□□□ -0.04
CiitaP79621 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Gm10012-201ENSMUST00000078252 192 ntBASIC14.82□□□□□ -0.04
CiitaP79621 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.82□□□□□ -0.04
CiitaP79621 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CiitaP79621 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.82□□□□□ -0.04
CiitaP79621 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.82□□□□□ -0.04
CiitaP79621 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CiitaP79621 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.81□□□□□ -0.04
CiitaP79621 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms