Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Gm15920-201ENSMUST00000118998 402 ntBASIC13.53□□□□□ -0.24
Traf6P70196 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.53□□□□□ -0.24
Traf6P70196 Gm37714-201ENSMUST00000194742 342 ntBASIC13.53□□□□□ -0.24
Traf6P70196 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Gm5312-201ENSMUST00000203728 547 ntBASIC13.53□□□□□ -0.24
Traf6P70196 Gm5779-201ENSMUST00000218467 910 ntBASIC13.53□□□□□ -0.24
Traf6P70196 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Traf6P70196 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.53□□□□□ -0.24
Traf6P70196 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.53□□□□□ -0.24
Traf6P70196 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.53□□□□□ -0.24
Traf6P70196 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Traf6P70196 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Traf6P70196 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Traf6P70196 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Traf6P70196 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Traf6P70196 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Traf6P70196 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.52□□□□□ -0.24
Traf6P70196 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.52□□□□□ -0.24
Traf6P70196 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Traf6P70196 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Traf6P70196 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.52□□□□□ -0.25
Traf6P70196 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Gm16476-201ENSMUST00000221544 139 ntBASIC13.52□□□□□ -0.25
Traf6P70196 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Traf6P70196 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.52□□□□□ -0.25
Traf6P70196 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Traf6P70196 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Traf6P70196 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Traf6P70196 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.51□□□□□ -0.25
Traf6P70196 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.51□□□□□ -0.25
Traf6P70196 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Traf6P70196 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Traf6P70196 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Traf6P70196 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Traf6P70196 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Traf6P70196 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Traf6P70196 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms