Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.03□□□□□ -0.16
Ybx1P62960 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ybx1P62960 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ybx1P62960 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ybx1P62960 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ybx1P62960 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ybx1P62960 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ybx1P62960 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ybx1P62960 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Ybx1P62960 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ybx1P62960 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ybx1P62960 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.02□□□□□ -0.16
Ybx1P62960 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ybx1P62960 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ybx1P62960 Gm6152-201ENSMUST00000151704 340 ntBASIC14.02□□□□□ -0.17
Ybx1P62960 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Gm5370-201ENSMUST00000187187 574 ntBASIC14.02□□□□□ -0.17
Ybx1P62960 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.02□□□□□ -0.17
Ybx1P62960 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Gm43179-201ENSMUST00000198797 275 ntBASIC14.02□□□□□ -0.17
Ybx1P62960 Gm43818-201ENSMUST00000200605 466 ntBASIC14.02□□□□□ -0.17
Ybx1P62960 Gm18054-201ENSMUST00000207539 555 ntBASIC14.02□□□□□ -0.17
Ybx1P62960 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.02□□□□□ -0.17
Ybx1P62960 Gm24447-201ENSMUST00000083977 338 ntBASIC14.02□□□□□ -0.17
Ybx1P62960 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ybx1P62960 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ybx1P62960 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ybx1P62960 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ybx1P62960 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Ybx1P62960 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ybx1P62960 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.02□□□□□ -0.17
Ybx1P62960 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.01□□□□□ -0.17
Ybx1P62960 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.01□□□□□ -0.17
Ybx1P62960 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.01□□□□□ -0.17
Ybx1P62960 Gm27331-201ENSMUST00000183705 60 ntBASIC14.01□□□□□ -0.17
Ybx1P62960 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.01□□□□□ -0.17
Ybx1P62960 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ybx1P62960 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Ybx1P62960 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.01□□□□□ -0.17
Ybx1P62960 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ybx1P62960 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ybx1P62960 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14□□□□□ -0.17
Ybx1P62960 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ybx1P62960 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14□□□□□ -0.17
Ybx1P62960 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Gm5940-201ENSMUST00000117582 1068 ntBASIC14□□□□□ -0.17
Ybx1P62960 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14□□□□□ -0.17
Ybx1P62960 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ybx1P62960 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14□□□□□ -0.17
Ybx1P62960 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms