Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Rpl39P62892 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Rpl39P62892 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Rpl39P62892 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rpl39P62892 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.77□□□□□ -0.84
Rpl39P62892 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rpl39P62892 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rpl39P62892 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rpl39P62892 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rpl39P62892 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Rpl39P62892 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rpl39P62892 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Rpl39P62892 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC9.77□□□□□ -0.85
Rpl39P62892 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Rpl39P62892 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.77□□□□□ -0.85
Rpl39P62892 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Rpl39P62892 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.77□□□□□ -0.85
Rpl39P62892 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC9.77□□□□□ -0.85
Rpl39P62892 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.77□□□□□ -0.85
Rpl39P62892 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Rpl39P62892 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Rpl39P62892 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.77□□□□□ -0.85
Rpl39P62892 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 AC153366.2-201ENSMUST00000219461 1984 ntBASIC9.77□□□□□ -0.85
Rpl39P62892 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.77□□□□□ -0.85
Rpl39P62892 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Rpl39P62892 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Rpl39P62892 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Rpl39P62892 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Rpl39P62892 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC9.77□□□□□ -0.85
Rpl39P62892 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Rpl39P62892 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rpl39P62892 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Rpl39P62892 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.76□□□□□ -0.85
Rpl39P62892 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Rpl39P62892 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.76□□□□□ -0.85
Rpl39P62892 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC9.76□□□□□ -0.85
Rpl39P62892 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.76□□□□□ -0.85
Rpl39P62892 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC9.76□□□□□ -0.85
Rpl39P62892 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Gm7461-201ENSMUST00000058918 827 ntBASIC9.76□□□□□ -0.85
Rpl39P62892 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.76□□□□□ -0.85
Rpl39P62892 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rpl39P62892 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rpl39P62892 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9.76□□□□□ -0.85
Rpl39P62892 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Rpl39P62892 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39P62892 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39P62892 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Rpl39P62892 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms