Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm6P62313 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.06□□□□□ -0.48
Lsm6P62313 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm6P62313 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Lsm6P62313 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.06□□□□□ -0.48
Lsm6P62313 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.06□□□□□ -0.48
Lsm6P62313 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Gm27306-201ENSMUST00000183970 107 ntBASIC12.06□□□□□ -0.48
Lsm6P62313 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lsm6P62313 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm6P62313 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm6P62313 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm6P62313 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lsm6P62313 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm6P62313 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm6P62313 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.06□□□□□ -0.48
Lsm6P62313 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Lsm6P62313 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm6P62313 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm6P62313 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Lsm6P62313 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm6P62313 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lsm6P62313 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm6P62313 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.05□□□□□ -0.48
Lsm6P62313 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.05□□□□□ -0.48
Lsm6P62313 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.05□□□□□ -0.48
Lsm6P62313 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.05□□□□□ -0.48
Lsm6P62313 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lsm6P62313 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm6P62313 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
Lsm6P62313 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm6P62313 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm6P62313 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.04□□□□□ -0.48
Lsm6P62313 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm6P62313 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm6P62313 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Lsm6P62313 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.04□□□□□ -0.48
Lsm6P62313 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lsm6P62313 Gm44872-201ENSMUST00000207864 420 ntBASIC12.04□□□□□ -0.48
Lsm6P62313 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.04□□□□□ -0.48
Lsm6P62313 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm6P62313 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms