Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lmo4P61969 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Lmo4P61969 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Lmo4P61969 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lmo4P61969 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.05□□□□□ -0.64
Lmo4P61969 Gm42693-201ENSMUST00000196779 631 ntBASIC11.05□□□□□ -0.64
Lmo4P61969 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.05□□□□□ -0.64
Lmo4P61969 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.05□□□□□ -0.64
Lmo4P61969 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.05□□□□□ -0.64
Lmo4P61969 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.05□□□□□ -0.64
Lmo4P61969 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.05□□□□□ -0.64
Lmo4P61969 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
Lmo4P61969 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.04□□□□□ -0.64
Lmo4P61969 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Lmo4P61969 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.04□□□□□ -0.64
Lmo4P61969 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Lmo4P61969 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Lmo4P61969 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lmo4P61969 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.04□□□□□ -0.64
Lmo4P61969 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lmo4P61969 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Gm23931-201ENSMUST00000103842 109 ntBASIC11.04□□□□□ -0.64
Lmo4P61969 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.04□□□□□ -0.64
Lmo4P61969 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Lmo4P61969 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lmo4P61969 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.04□□□□□ -0.64
Lmo4P61969 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lmo4P61969 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lmo4P61969 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lmo4P61969 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.04□□□□□ -0.64
Lmo4P61969 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lmo4P61969 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lmo4P61969 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lmo4P61969 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.03□□□□□ -0.64
Lmo4P61969 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.03□□□□□ -0.64
Lmo4P61969 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.03□□□□□ -0.64
Lmo4P61969 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.03□□□□□ -0.64
Lmo4P61969 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Gm5187-201ENSMUST00000117317 991 ntBASIC11.03□□□□□ -0.64
Lmo4P61969 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Lmo4P61969 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Lmo4P61969 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.03□□□□□ -0.64
Lmo4P61969 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.03□□□□□ -0.64
Lmo4P61969 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.03□□□□□ -0.64
Lmo4P61969 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.03□□□□□ -0.64
Lmo4P61969 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.03□□□□□ -0.64
Lmo4P61969 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lmo4P61969 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lmo4P61969 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Lmo4P61969 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.03□□□□□ -0.64
Lmo4P61969 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.03□□□□□ -0.64
Lmo4P61969 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lmo4P61969 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms