Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh11P55288 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdh11P55288 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh11P55288 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdh11P55288 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.54□□□□□ -0.4
Cdh11P55288 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh11P55288 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdh11P55288 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh11P55288 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh11P55288 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh11P55288 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.54□□□□□ -0.4
Cdh11P55288 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh11P55288 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdh11P55288 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdh11P55288 Gm13015-201ENSMUST00000118674 204 ntBASIC12.53□□□□□ -0.4
Cdh11P55288 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Gm27321-201ENSMUST00000185021 205 ntBASIC12.53□□□□□ -0.4
Cdh11P55288 Gm37230-201ENSMUST00000194491 818 ntBASIC12.53□□□□□ -0.4
Cdh11P55288 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh11P55288 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdh11P55288 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdh11P55288 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh11P55288 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cdh11P55288 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cdh11P55288 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh11P55288 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdh11P55288 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.52□□□□□ -0.41
Cdh11P55288 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Cdh11P55288 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.52□□□□□ -0.41
Cdh11P55288 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.52□□□□□ -0.41
Cdh11P55288 Gm27618-201ENSMUST00000183671 60 ntBASIC12.52□□□□□ -0.41
Cdh11P55288 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdh11P55288 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdh11P55288 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh11P55288 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.52□□□□□ -0.41
Cdh11P55288 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdh11P55288 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdh11P55288 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.51□□□□□ -0.41
Cdh11P55288 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh11P55288 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh11P55288 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh11P55288 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh11P55288 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdh11P55288 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms