Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lhx3P50481 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx3P50481 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx3P50481 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx3P50481 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lhx3P50481 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lhx3P50481 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Lhx3P50481 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lhx3P50481 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
Lhx3P50481 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Gm6983-201ENSMUST00000214912 628 ntBASIC13.87□□□□□ -0.19
Lhx3P50481 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.87□□□□□ -0.19
Lhx3P50481 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.87□□□□□ -0.19
Lhx3P50481 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.87□□□□□ -0.19
Lhx3P50481 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.87□□□□□ -0.19
Lhx3P50481 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lhx3P50481 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.87□□□□□ -0.19
Lhx3P50481 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
Lhx3P50481 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.87□□□□□ -0.19
Lhx3P50481 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.87□□□□□ -0.19
Lhx3P50481 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Lhx3P50481 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Lhx3P50481 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lhx3P50481 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.86□□□□□ -0.19
Lhx3P50481 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.86□□□□□ -0.19
Lhx3P50481 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Lhx3P50481 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Lhx3P50481 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx3P50481 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.86□□□□□ -0.19
Lhx3P50481 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx3P50481 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Lhx3P50481 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.86□□□□□ -0.19
Lhx3P50481 Gm42550-201ENSMUST00000201553 960 ntBASIC13.86□□□□□ -0.19
Lhx3P50481 Gm8463-201ENSMUST00000208573 613 ntBASIC13.86□□□□□ -0.19
Lhx3P50481 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Gm5186-201ENSMUST00000218781 920 ntBASIC13.86□□□□□ -0.19
Lhx3P50481 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lhx3P50481 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx3P50481 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Lhx3P50481 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Lhx3P50481 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.86□□□□□ -0.19
Lhx3P50481 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Lhx3P50481 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.86□□□□□ -0.19
Lhx3P50481 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx3P50481 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx3P50481 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx3P50481 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx3P50481 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx3P50481 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx3P50481 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lhx3P50481 Gm5745-201ENSMUST00000183748 313 ntBASIC13.85□□□□□ -0.19
Lhx3P50481 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.85□□□□□ -0.19
Lhx3P50481 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Lhx3P50481 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx3P50481 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx3P50481 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx3P50481 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lhx3P50481 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms