Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl5P50228 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl5P50228 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl5P50228 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl5P50228 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl5P50228 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cxcl5P50228 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl5P50228 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.98□□□□□ -0.49
Cxcl5P50228 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.98□□□□□ -0.49
Cxcl5P50228 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gm27525-201ENSMUST00000184465 107 ntBASIC11.98□□□□□ -0.49
Cxcl5P50228 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.98□□□□□ -0.49
Cxcl5P50228 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.98□□□□□ -0.49
Cxcl5P50228 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.98□□□□□ -0.49
Cxcl5P50228 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.98□□□□□ -0.49
Cxcl5P50228 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl5P50228 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cxcl5P50228 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.97□□□□□ -0.49
Cxcl5P50228 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.97□□□□□ -0.49
Cxcl5P50228 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.97□□□□□ -0.49
Cxcl5P50228 Gm6973-201ENSMUST00000117080 721 ntBASIC11.97□□□□□ -0.49
Cxcl5P50228 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cxcl5P50228 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Cxcl5P50228 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Cxcl5P50228 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Gm27920-201ENSMUST00000183953 96 ntBASIC11.97□□□□□ -0.49
Cxcl5P50228 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.97□□□□□ -0.49
Cxcl5P50228 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl5P50228 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.97□□□□□ -0.49
Cxcl5P50228 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.97□□□□□ -0.49
Cxcl5P50228 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms