Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.98□□□□□ -0.33
Nkx2-6P43688 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.98□□□□□ -0.33
Nkx2-6P43688 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.97□□□□□ -0.33
Nkx2-6P43688 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Mir698-201ENSMUST00000102164 109 ntBASIC12.97□□□□□ -0.33
Nkx2-6P43688 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.97□□□□□ -0.33
Nkx2-6P43688 Gm11425-201ENSMUST00000119608 498 ntBASIC12.97□□□□□ -0.33
Nkx2-6P43688 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.97□□□□□ -0.33
Nkx2-6P43688 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Gm44397-201ENSMUST00000195950 113 ntBASIC12.97□□□□□ -0.33
Nkx2-6P43688 Gm43630-201ENSMUST00000201550 776 ntBASIC12.97□□□□□ -0.33
Nkx2-6P43688 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Gm9396-201ENSMUST00000076703 567 ntBASIC12.97□□□□□ -0.33
Nkx2-6P43688 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Nkx2-6P43688 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.96□□□□□ -0.33
Nkx2-6P43688 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gm12485-201ENSMUST00000119641 291 ntBASIC12.96□□□□□ -0.33
Nkx2-6P43688 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gm29741-201ENSMUST00000192667 421 ntBASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gm38223-201ENSMUST00000194484 695 ntBASIC12.96□□□□□ -0.33
Nkx2-6P43688 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gm10012-201ENSMUST00000078252 192 ntBASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gm24447-201ENSMUST00000083977 338 ntBASIC12.96□□□□□ -0.33
Nkx2-6P43688 Mir497b-201ENSMUST00000093601 125 ntBASIC12.96□□□□□ -0.33
Nkx2-6P43688 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx2-6P43688 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-6P43688 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-6P43688 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-6P43688 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nkx2-6P43688 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-6P43688 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.96□□□□□ -0.34
Nkx2-6P43688 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx2-6P43688 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms