Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm16476-201ENSMUST00000221544 139 ntBASIC13.26□□□□□ -0.29
Tnfsf4P43488 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.26□□□□□ -0.29
Tnfsf4P43488 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.26□□□□□ -0.29
Tnfsf4P43488 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Mir497b-201ENSMUST00000093601 125 ntBASIC13.26□□□□□ -0.29
Tnfsf4P43488 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.25□□□□□ -0.29
Tnfsf4P43488 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.25□□□□□ -0.29
Tnfsf4P43488 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Gm44335-201ENSMUST00000196879 141 ntBASIC13.25□□□□□ -0.29
Tnfsf4P43488 Gm44297-201ENSMUST00000198304 141 ntBASIC13.25□□□□□ -0.29
Tnfsf4P43488 Gm44346-201ENSMUST00000198851 141 ntBASIC13.25□□□□□ -0.29
Tnfsf4P43488 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.25□□□□□ -0.29
Tnfsf4P43488 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.24□□□□□ -0.29
Tnfsf4P43488 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Mir698-201ENSMUST00000102164 109 ntBASIC13.24□□□□□ -0.29
Tnfsf4P43488 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Gm12428-201ENSMUST00000119844 727 ntBASIC13.24□□□□□ -0.29
Tnfsf4P43488 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.24□□□□□ -0.29
Tnfsf4P43488 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.24□□□□□ -0.29
Tnfsf4P43488 Gm43474-201ENSMUST00000196415 774 ntBASIC13.24□□□□□ -0.29
Tnfsf4P43488 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tnfsf4P43488 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Tnfsf4P43488 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.23□□□□□ -0.29
Tnfsf4P43488 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tnfsf4P43488 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms