Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cdx2P43241 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdx2P43241 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm11793-201ENSMUST00000120433 981 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm25927-201ENSMUST00000175058 117 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Gm18827-201ENSMUST00000188341 790 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm4857-201ENSMUST00000192718 785 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdx2P43241 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Gm18056-201ENSMUST00000207670 568 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Gm18061-201ENSMUST00000208350 562 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Gm18063-201ENSMUST00000208529 568 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Gm18052-201ENSMUST00000208750 559 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Gm10146-201ENSMUST00000072739 309 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cdx2P43241 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Cdx2P43241 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdx2P43241 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdx2P43241 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.97□□□□□ -0.33
Cdx2P43241 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdx2P43241 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cdx2P43241 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdx2P43241 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Gm15236-201ENSMUST00000117309 379 ntBASIC12.97□□□□□ -0.33
Cdx2P43241 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdx2P43241 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Gm43758-201ENSMUST00000199500 367 ntBASIC12.97□□□□□ -0.33
Cdx2P43241 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdx2P43241 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdx2P43241 Gm9368-201ENSMUST00000219348 831 ntBASIC12.97□□□□□ -0.33
Cdx2P43241 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdx2P43241 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cdx2P43241 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdx2P43241 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.97□□□□□ -0.33
Cdx2P43241 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdx2P43241 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdx2P43241 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx2P43241 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdx2P43241 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdx2P43241 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdx2P43241 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Cdx2P43241 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.96□□□□□ -0.33
Cdx2P43241 Gm11618-201ENSMUST00000117946 267 ntBASIC12.96□□□□□ -0.33
Cdx2P43241 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Cdx2P43241 Gm25261-201ENSMUST00000157416 134 ntBASIC12.96□□□□□ -0.33
Cdx2P43241 Gm7029-201ENSMUST00000173226 450 ntBASIC12.96□□□□□ -0.33
Cdx2P43241 Mir3102-201ENSMUST00000175555 104 ntBASIC12.96□□□□□ -0.33
Cdx2P43241 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.96□□□□□ -0.33
Cdx2P43241 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.96□□□□□ -0.33
Cdx2P43241 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Cdx2P43241 Olfr284-202ENSMUST00000206647 966 ntBASIC12.96□□□□□ -0.33
Cdx2P43241 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms