Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.31□□□□□ -0.28
TfamP40630 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TfamP40630 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.31□□□□□ -0.28
TfamP40630 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.31□□□□□ -0.28
TfamP40630 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TfamP40630 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.31□□□□□ -0.28
TfamP40630 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TfamP40630 Gm12428-201ENSMUST00000119844 727 ntBASIC13.31□□□□□ -0.28
TfamP40630 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.31□□□□□ -0.28
TfamP40630 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.31□□□□□ -0.28
TfamP40630 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.31□□□□□ -0.28
TfamP40630 Gm2756-201ENSMUST00000195851 400 ntBASIC13.31□□□□□ -0.28
TfamP40630 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.31□□□□□ -0.28
TfamP40630 Gm7774-201ENSMUST00000200064 533 ntBASIC13.31□□□□□ -0.28
TfamP40630 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.31□□□□□ -0.28
TfamP40630 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TfamP40630 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.31□□□□□ -0.28
TfamP40630 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.3□□□□□ -0.28
TfamP40630 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.3□□□□□ -0.28
TfamP40630 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.3□□□□□ -0.28
TfamP40630 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TfamP40630 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TfamP40630 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TfamP40630 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.3□□□□□ -0.28
TfamP40630 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TfamP40630 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.3□□□□□ -0.28
TfamP40630 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.3□□□□□ -0.28
TfamP40630 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TfamP40630 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TfamP40630 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TfamP40630 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TfamP40630 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TfamP40630 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.29□□□□□ -0.28
TfamP40630 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.29□□□□□ -0.28
TfamP40630 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TfamP40630 Gm6415-201ENSMUST00000118488 348 ntBASIC13.29□□□□□ -0.28
TfamP40630 Mir1897-201ENSMUST00000122581 272 ntBASIC13.29□□□□□ -0.28
TfamP40630 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.29□□□□□ -0.28
TfamP40630 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TfamP40630 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.29□□□□□ -0.28
TfamP40630 Gm28630-201ENSMUST00000187806 498 ntBASIC13.29□□□□□ -0.28
TfamP40630 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.29□□□□□ -0.28
TfamP40630 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.29□□□□□ -0.28
TfamP40630 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TfamP40630 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms