Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Rom1P32958 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Rom1P32958 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.85□□□□□ -0.67
Rom1P32958 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.85□□□□□ -0.67
Rom1P32958 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rom1P32958 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Rom1P32958 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rom1P32958 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rom1P32958 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Rom1P32958 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.84□□□□□ -0.67
Rom1P32958 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.84□□□□□ -0.67
Rom1P32958 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rom1P32958 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Gm11543-201ENSMUST00000120758 370 ntBASIC10.84□□□□□ -0.67
Rom1P32958 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rom1P32958 AA619741-201ENSMUST00000195095 646 ntBASIC10.84□□□□□ -0.67
Rom1P32958 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.84□□□□□ -0.67
Rom1P32958 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.84□□□□□ -0.67
Rom1P32958 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Birc2-201ENSMUST00000054878 378 ntBASIC10.84□□□□□ -0.67
Rom1P32958 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rom1P32958 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.84□□□□□ -0.67
Rom1P32958 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.84□□□□□ -0.67
Rom1P32958 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rom1P32958 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.84□□□□□ -0.67
Rom1P32958 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rom1P32958 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.83□□□□□ -0.68
Rom1P32958 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rom1P32958 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms