Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.81□□□□□ -0.52
Slc6a1P31648 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Gm4899-201ENSMUST00000178708 719 ntBASIC11.81□□□□□ -0.52
Slc6a1P31648 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.81□□□□□ -0.52
Slc6a1P31648 Gm27300-201ENSMUST00000184085 97 ntBASIC11.81□□□□□ -0.52
Slc6a1P31648 Gm27335-201ENSMUST00000184758 97 ntBASIC11.81□□□□□ -0.52
Slc6a1P31648 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.81□□□□□ -0.52
Slc6a1P31648 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Slc6a1P31648 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Slc6a1P31648 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.8□□□□□ -0.52
Slc6a1P31648 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.8□□□□□ -0.52
Slc6a1P31648 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.8□□□□□ -0.52
Slc6a1P31648 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.8□□□□□ -0.52
Slc6a1P31648 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Gm11025-201ENSMUST00000140773 466 ntBASIC11.8□□□□□ -0.52
Slc6a1P31648 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.8□□□□□ -0.52
Slc6a1P31648 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.8□□□□□ -0.52
Slc6a1P31648 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Slc6a1P31648 Gm10175-201ENSMUST00000086013 645 ntBASIC11.8□□□□□ -0.52
Slc6a1P31648 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.8□□□□□ -0.52
Slc6a1P31648 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Slc6a1P31648 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Slc6a1P31648 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.8□□□□□ -0.52
Slc6a1P31648 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc6a1P31648 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms