Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.31□□□□□ -0.12
H2afxP27661 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.31□□□□□ -0.12
H2afxP27661 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.31□□□□□ -0.12
H2afxP27661 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.31□□□□□ -0.12
H2afxP27661 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
H2afxP27661 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.31□□□□□ -0.12
H2afxP27661 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2afxP27661 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afxP27661 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
H2afxP27661 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.3□□□□□ -0.12
H2afxP27661 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H2afxP27661 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.3□□□□□ -0.12
H2afxP27661 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.3□□□□□ -0.12
H2afxP27661 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H2afxP27661 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H2afxP27661 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afxP27661 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H2afxP27661 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
H2afxP27661 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2afxP27661 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2afxP27661 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.29□□□□□ -0.12
H2afxP27661 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.29□□□□□ -0.12
H2afxP27661 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afxP27661 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H2afxP27661 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.29□□□□□ -0.12
H2afxP27661 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.29□□□□□ -0.12
H2afxP27661 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afxP27661 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms