Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cd40P27512 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cd40P27512 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cd40P27512 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cd40P27512 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 Gm5354-201ENSMUST00000182417 973 ntBASIC12.41□□□□□ -0.42
Cd40P27512 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.41□□□□□ -0.42
Cd40P27512 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.41□□□□□ -0.42
Cd40P27512 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.41□□□□□ -0.42
Cd40P27512 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.41□□□□□ -0.42
Cd40P27512 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.41□□□□□ -0.42
Cd40P27512 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.41□□□□□ -0.42
Cd40P27512 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40P27512 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cd40P27512 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cd40P27512 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cd40P27512 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cd40P27512 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.4□□□□□ -0.42
Cd40P27512 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Cd40P27512 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cd40P27512 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd40P27512 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Syt7-205ENSMUST00000224135 1557 ntBASIC12.4□□□□□ -0.42
Cd40P27512 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd40P27512 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cd40P27512 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.4□□□□□ -0.42
Cd40P27512 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.4□□□□□ -0.42
Cd40P27512 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Cd40P27512 Gm6218-201ENSMUST00000219812 628 ntBASIC12.4□□□□□ -0.42
Cd40P27512 Gm19220-201ENSMUST00000222682 803 ntBASIC12.4□□□□□ -0.42
Cd40P27512 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cd40P27512 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cd40P27512 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40P27512 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cd40P27512 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
Cd40P27512 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Cd40P27512 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd40P27512 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd40P27512 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd40P27512 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cd40P27512 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.39□□□□□ -0.43
Cd40P27512 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cd40P27512 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cd40P27512 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.39□□□□□ -0.43
Cd40P27512 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Gm11524-201ENSMUST00000119349 807 ntBASIC12.39□□□□□ -0.43
Cd40P27512 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cd40P27512 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cd40P27512 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cd40P27512 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.39□□□□□ -0.43
Cd40P27512 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cd40P27512 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.39□□□□□ -0.43
Cd40P27512 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms