Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Clk1P22518 Mir125a-201ENSMUST00000083545 68 ntBASIC12.85□□□□□ -0.35
Clk1P22518 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
Clk1P22518 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Clk1P22518 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clk1P22518 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Clk1P22518 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clk1P22518 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.84□□□□□ -0.35
Clk1P22518 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Clk1P22518 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.84□□□□□ -0.35
Clk1P22518 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.84□□□□□ -0.35
Clk1P22518 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Gm8410-201ENSMUST00000117225 605 ntBASIC12.84□□□□□ -0.35
Clk1P22518 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.84□□□□□ -0.35
Clk1P22518 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.84□□□□□ -0.35
Clk1P22518 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.84□□□□□ -0.35
Clk1P22518 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Clk1P22518 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.84□□□□□ -0.35
Clk1P22518 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.84□□□□□ -0.35
Clk1P22518 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.84□□□□□ -0.35
Clk1P22518 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.84□□□□□ -0.35
Clk1P22518 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Clk1P22518 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clk1P22518 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.84□□□□□ -0.35
Clk1P22518 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Clk1P22518 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Clk1P22518 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.84□□□□□ -0.35
Clk1P22518 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Clk1P22518 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clk1P22518 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Clk1P22518 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clk1P22518 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Clk1P22518 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Clk1P22518 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Clk1P22518 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Clk1P22518 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Clk1P22518 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Clk1P22518 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Clk1P22518 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.83□□□□□ -0.36
Clk1P22518 Gm22175-201ENSMUST00000175007 78 ntBASIC12.83□□□□□ -0.36
Clk1P22518 Gm25948-201ENSMUST00000175334 112 ntBASIC12.83□□□□□ -0.36
Clk1P22518 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.83□□□□□ -0.36
Clk1P22518 Dupd1-202ENSMUST00000224735 548 ntBASIC12.83□□□□□ -0.36
Clk1P22518 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.83□□□□□ -0.36
Clk1P22518 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Clk1P22518 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clk1P22518 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.83□□□□□ -0.36
Clk1P22518 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms