Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cntn1P12960 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Gm11524-201ENSMUST00000119349 807 ntBASIC13.16□□□□□ -0.3
Cntn1P12960 Gm15376-201ENSMUST00000122258 783 ntBASIC13.16□□□□□ -0.3
Cntn1P12960 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Gm27772-201ENSMUST00000184900 187 ntBASIC13.16□□□□□ -0.3
Cntn1P12960 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.16□□□□□ -0.3
Cntn1P12960 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Cntn1P12960 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Cntn1P12960 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cntn1P12960 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.16□□□□□ -0.3
Cntn1P12960 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cntn1P12960 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cntn1P12960 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cntn1P12960 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.15□□□□□ -0.3
Cntn1P12960 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.15□□□□□ -0.3
Cntn1P12960 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.15□□□□□ -0.3
Cntn1P12960 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cntn1P12960 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.15□□□□□ -0.3
Cntn1P12960 Gm27701-201ENSMUST00000184498 110 ntBASIC13.15□□□□□ -0.3
Cntn1P12960 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.15□□□□□ -0.3
Cntn1P12960 Gm28911-201ENSMUST00000188837 117 ntBASIC13.15□□□□□ -0.3
Cntn1P12960 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.15□□□□□ -0.3
Cntn1P12960 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cntn1P12960 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cntn1P12960 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.15□□□□□ -0.31
Cntn1P12960 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Cntn1P12960 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Cntn1P12960 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Cntn1P12960 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cntn1P12960 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cntn1P12960 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.14□□□□□ -0.31
Cntn1P12960 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cntn1P12960 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
Cntn1P12960 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.14□□□□□ -0.31
Cntn1P12960 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.14□□□□□ -0.31
Cntn1P12960 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cntn1P12960 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cntn1P12960 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.14□□□□□ -0.31
Cntn1P12960 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.14□□□□□ -0.31
Cntn1P12960 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cntn1P12960 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.14□□□□□ -0.31
Cntn1P12960 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms