Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccl3P10855 Gm43133-201ENSMUST00000197472 463 ntBASIC12.07□□□□□ -0.48
Ccl3P10855 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ccl3P10855 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Ccl3P10855 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccl3P10855 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ccl3P10855 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
Ccl3P10855 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccl3P10855 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ccl3P10855 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.06□□□□□ -0.48
Ccl3P10855 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccl3P10855 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccl3P10855 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccl3P10855 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccl3P10855 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.06□□□□□ -0.48
Ccl3P10855 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccl3P10855 Gm10146-201ENSMUST00000072739 309 ntBASIC12.06□□□□□ -0.48
Ccl3P10855 Gm16372-201ENSMUST00000073088 450 ntBASIC12.06□□□□□ -0.48
Ccl3P10855 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccl3P10855 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccl3P10855 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccl3P10855 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccl3P10855 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ccl3P10855 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccl3P10855 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Ccl3P10855 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccl3P10855 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccl3P10855 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccl3P10855 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccl3P10855 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccl3P10855 Gm25927-201ENSMUST00000175058 117 ntBASIC12.05□□□□□ -0.48
Ccl3P10855 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.05□□□□□ -0.48
Ccl3P10855 Gm7783-201ENSMUST00000204795 781 ntBASIC12.05□□□□□ -0.48
Ccl3P10855 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.05□□□□□ -0.48
Ccl3P10855 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccl3P10855 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.05□□□□□ -0.48
Ccl3P10855 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccl3P10855 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccl3P10855 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Ccl3P10855 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccl3P10855 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccl3P10855 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms