Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Gm14928-201ENSMUST00000120198 477 ntBASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Gm44387-201ENSMUST00000196298 145 ntBASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Gm43553-201ENSMUST00000200900 685 ntBASIC11.52□□□□□ -0.57
Ly6c1P0CW02 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ly6c1P0CW02 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Gm45071-201ENSMUST00000205353 571 ntBASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 AC125539.1-201ENSMUST00000227423 622 ntBASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ly6c1P0CW02 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gm23984-201ENSMUST00000157139 203 ntBASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gm5354-201ENSMUST00000182417 973 ntBASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gm43094-201ENSMUST00000196549 921 ntBASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gm18624-201ENSMUST00000220966 658 ntBASIC11.5□□□□□ -0.57
Ly6c1P0CW02 AC102542.1-201ENSMUST00000225204 1138 ntBASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ly6c1P0CW02 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms