Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm8097-201ENSMUST00000117903 829 ntBASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm13559-201ENSMUST00000120476 863 ntBASIC9.4□□□□□ -0.9
Smim1P0C8K7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm22697-201ENSMUST00000175194 63 ntBASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Smim1P0C8K7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm43332-201ENSMUST00000202511 1044 ntBASIC9.4□□□□□ -0.9
Smim1P0C8K7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.4□□□□□ -0.9
Smim1P0C8K7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim1P0C8K7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smim1P0C8K7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smim1P0C8K7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.91
Smim1P0C8K7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smim1P0C8K7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC9.39□□□□□ -0.91
Smim1P0C8K7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Gm6296-201ENSMUST00000222599 943 ntBASIC9.39□□□□□ -0.91
Smim1P0C8K7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.39□□□□□ -0.91
Smim1P0C8K7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Smim1P0C8K7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC9.38□□□□□ -0.91
Smim1P0C8K7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Gm14452-201ENSMUST00000118680 1632 ntBASIC9.38□□□□□ -0.91
Smim1P0C8K7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.38□□□□□ -0.91
Smim1P0C8K7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smim1P0C8K7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms