Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
P04224 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.05□□□□□ -0.48
P04224 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
P04224 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
P04224 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.04□□□□□ -0.48
P04224 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
P04224 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.04□□□□□ -0.48
P04224 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
P04224 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.04□□□□□ -0.48
P04224 Gm9182-201ENSMUST00000217829 639 ntBASIC12.04□□□□□ -0.48
P04224 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
P04224 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
P04224 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
P04224 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
P04224 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04224 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
P04224 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.03□□□□□ -0.48
P04224 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.03□□□□□ -0.48
P04224 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.03□□□□□ -0.48
P04224 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.03□□□□□ -0.48
P04224 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
P04224 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.03□□□□□ -0.48
P04224 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
P04224 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.03□□□□□ -0.48
P04224 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.03□□□□□ -0.48
P04224 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04224 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P04224 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms