Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P04213 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.17□□□□□ -0.3
P04213 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.17□□□□□ -0.3
P04213 Gm7775-201ENSMUST00000218871 853 ntBASIC13.17□□□□□ -0.3
P04213 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.17□□□□□ -0.3
P04213 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
P04213 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P04213 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
P04213 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
P04213 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
P04213 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
P04213 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
P04213 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.16□□□□□ -0.3
P04213 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.16□□□□□ -0.3
P04213 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P04213 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
P04213 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
P04213 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.16□□□□□ -0.3
P04213 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
P04213 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P04213 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.15□□□□□ -0.3
P04213 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P04213 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.15□□□□□ -0.3
P04213 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.15□□□□□ -0.3
P04213 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P04213 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
P04213 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
P04213 Gm12585-201ENSMUST00000117307 290 ntBASIC13.15□□□□□ -0.3
P04213 Gm14767-201ENSMUST00000121559 586 ntBASIC13.15□□□□□ -0.3
P04213 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Gm9063-201ENSMUST00000223299 582 ntBASIC13.15□□□□□ -0.3
P04213 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
P04213 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P04213 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P04213 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P04213 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.15□□□□□ -0.31
P04213 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.15□□□□□ -0.31
P04213 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04213 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04213 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04213 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
P04213 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04213 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04213 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04213 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P04213 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.14□□□□□ -0.31
P04213 Gm3436-201ENSMUST00000179930 840 ntBASIC13.14□□□□□ -0.31
P04213 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms