Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa3P02831 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa3P02831 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.53□□□□□ -0.56
Hoxa3P02831 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa3P02831 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa3P02831 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa3P02831 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa3P02831 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa3P02831 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Hoxa3P02831 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa3P02831 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa3P02831 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxa3P02831 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxa3P02831 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxa3P02831 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.52□□□□□ -0.57
Hoxa3P02831 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.52□□□□□ -0.57
Hoxa3P02831 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxa3P02831 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxa3P02831 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Hoxa3P02831 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.52□□□□□ -0.57
Hoxa3P02831 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxa3P02831 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa3P02831 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxa3P02831 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.51□□□□□ -0.57
Hoxa3P02831 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.51□□□□□ -0.57
Hoxa3P02831 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.51□□□□□ -0.57
Hoxa3P02831 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa3P02831 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa3P02831 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa3P02831 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms