Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hbb-b1P02088 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.62□□□□□ -0.87
Hbb-b1P02088 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Gm44719-201ENSMUST00000206404 149 ntBASIC9.62□□□□□ -0.87
Hbb-b1P02088 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hbb-b1P02088 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.61□□□□□ -0.87
Hbb-b1P02088 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.61□□□□□ -0.87
Hbb-b1P02088 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Gm25745-201ENSMUST00000174945 133 ntBASIC9.61□□□□□ -0.87
Hbb-b1P02088 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Gm5417-201ENSMUST00000079706 384 ntBASIC9.61□□□□□ -0.87
Hbb-b1P02088 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Hbb-b1P02088 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms