Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
SgceO70258 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SgceO70258 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SgceO70258 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SgceO70258 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgceO70258 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SgceO70258 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SgceO70258 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SgceO70258 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SgceO70258 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SgceO70258 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SgceO70258 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Gm12428-201ENSMUST00000119844 727 ntBASIC12.31□□□□□ -0.44
SgceO70258 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SgceO70258 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Gm33320-201ENSMUST00000192232 530 ntBASIC12.31□□□□□ -0.44
SgceO70258 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.31□□□□□ -0.44
SgceO70258 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.31□□□□□ -0.44
SgceO70258 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SgceO70258 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SgceO70258 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SgceO70258 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.31□□□□□ -0.44
SgceO70258 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgceO70258 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.31□□□□□ -0.44
SgceO70258 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SgceO70258 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgceO70258 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SgceO70258 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.3□□□□□ -0.44
SgceO70258 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.3□□□□□ -0.44
SgceO70258 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.3□□□□□ -0.44
SgceO70258 Gm13616-201ENSMUST00000120600 222 ntBASIC12.3□□□□□ -0.44
SgceO70258 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.3□□□□□ -0.44
SgceO70258 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.3□□□□□ -0.44
SgceO70258 Gm46209-201ENSMUST00000217912 553 ntBASIC12.3□□□□□ -0.44
SgceO70258 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SgceO70258 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.3□□□□□ -0.44
SgceO70258 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgceO70258 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SgceO70258 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgceO70258 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.29□□□□□ -0.44
SgceO70258 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgceO70258 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgceO70258 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.29□□□□□ -0.44
SgceO70258 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms