Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.32■□□□□ 0.2
Smarce1O54941 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.32■□□□□ 0.2
Smarce1O54941 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.32■□□□□ 0.2
Smarce1O54941 Gm33320-201ENSMUST00000192232 530 ntBASIC16.32■□□□□ 0.2
Smarce1O54941 Gm44771-201ENSMUST00000206975 626 ntBASIC16.32■□□□□ 0.2
Smarce1O54941 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.32■□□□□ 0.2
Smarce1O54941 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Smarce1O54941 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Smarce1O54941 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smarce1O54941 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Smarce1O54941 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Grk6-205ENSMUST00000224653 2976 ntBASIC16.31■□□□□ 0.2
Smarce1O54941 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.31■□□□□ 0.2
Smarce1O54941 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Gm24543-201ENSMUST00000103867 82 ntBASIC16.31■□□□□ 0.2
Smarce1O54941 Gm27525-201ENSMUST00000184465 107 ntBASIC16.31■□□□□ 0.2
Smarce1O54941 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.31■□□□□ 0.2
Smarce1O54941 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarce1O54941 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Mir497b-201ENSMUST00000093601 125 ntBASIC16.31■□□□□ 0.2
Smarce1O54941 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.31■□□□□ 0.2
Smarce1O54941 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Smarce1O54941 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarce1O54941 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Smarce1O54941 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarce1O54941 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarce1O54941 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarce1O54941 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.3■□□□□ 0.2
Smarce1O54941 Gm43474-201ENSMUST00000196415 774 ntBASIC16.3■□□□□ 0.2
Smarce1O54941 Gm44335-201ENSMUST00000196879 141 ntBASIC16.3■□□□□ 0.2
Smarce1O54941 Gm44297-201ENSMUST00000198304 141 ntBASIC16.3■□□□□ 0.2
Smarce1O54941 Gm44346-201ENSMUST00000198851 141 ntBASIC16.3■□□□□ 0.2
Smarce1O54941 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 AW822252-206ENSMUST00000208904 237 ntBASIC16.3■□□□□ 0.2
Smarce1O54941 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smarce1O54941 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarce1O54941 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarce1O54941 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Smarce1O54941 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.3■□□□□ 0.2
Smarce1O54941 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Smarce1O54941 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smarce1O54941 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarce1O54941 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarce1O54941 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarce1O54941 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Smarce1O54941 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smarce1O54941 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.29■□□□□ 0.2
Smarce1O54941 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarce1O54941 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.29■□□□□ 0.2
Smarce1O54941 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms