Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm6983-201ENSMUST00000214912 628 ntBASIC14.12□□□□□ -0.15
Sdc4O35988 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sdc4O35988 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Sdc4O35988 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sdc4O35988 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Sdc4O35988 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.11□□□□□ -0.15
Sdc4O35988 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.11□□□□□ -0.15
Sdc4O35988 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Gm12928-201ENSMUST00000117115 573 ntBASIC14.11□□□□□ -0.15
Sdc4O35988 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.11□□□□□ -0.15
Sdc4O35988 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Gm17150-201ENSMUST00000165577 381 ntBASIC14.11□□□□□ -0.15
Sdc4O35988 Gm44719-201ENSMUST00000206404 149 ntBASIC14.11□□□□□ -0.15
Sdc4O35988 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.11□□□□□ -0.15
Sdc4O35988 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.11□□□□□ -0.15
Sdc4O35988 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sdc4O35988 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Gm5161-201ENSMUST00000075243 853 ntBASIC14.11□□□□□ -0.15
Sdc4O35988 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.11□□□□□ -0.15
Sdc4O35988 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sdc4O35988 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.11□□□□□ -0.15
Sdc4O35988 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sdc4O35988 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Sdc4O35988 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.1□□□□□ -0.15
Sdc4O35988 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.1□□□□□ -0.15
Sdc4O35988 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.1□□□□□ -0.15
Sdc4O35988 Gm15770-201ENSMUST00000117498 584 ntBASIC14.1□□□□□ -0.15
Sdc4O35988 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.1□□□□□ -0.15
Sdc4O35988 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.1□□□□□ -0.15
Sdc4O35988 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sdc4O35988 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Gm44397-201ENSMUST00000195950 113 ntBASIC14.1□□□□□ -0.15
Sdc4O35988 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.1□□□□□ -0.15
Sdc4O35988 Gm8463-201ENSMUST00000208573 613 ntBASIC14.1□□□□□ -0.15
Sdc4O35988 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.1□□□□□ -0.15
Sdc4O35988 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.1□□□□□ -0.15
Sdc4O35988 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.1□□□□□ -0.15
Sdc4O35988 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Gm24447-201ENSMUST00000083977 338 ntBASIC14.1□□□□□ -0.15
Sdc4O35988 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Sdc4O35988 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sdc4O35988 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.1□□□□□ -0.15
Sdc4O35988 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.1□□□□□ -0.15
Sdc4O35988 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.1□□□□□ -0.15
Sdc4O35988 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Sdc4O35988 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sdc4O35988 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Sdc4O35988 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sdc4O35988 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc4O35988 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms