Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lsm2O35900 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.21□□□□□ -0.45
Lsm2O35900 Gm13823-201ENSMUST00000119930 345 ntBASIC12.21□□□□□ -0.45
Lsm2O35900 Gm11543-201ENSMUST00000120758 370 ntBASIC12.21□□□□□ -0.45
Lsm2O35900 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Lsm2O35900 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 AA619741-201ENSMUST00000195095 646 ntBASIC12.21□□□□□ -0.45
Lsm2O35900 Gm6443-201ENSMUST00000203599 874 ntBASIC12.21□□□□□ -0.45
Lsm2O35900 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm2O35900 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lsm2O35900 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm2O35900 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm2O35900 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm2O35900 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm2O35900 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Lsm2O35900 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm2O35900 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm2O35900 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lsm2O35900 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Lsm2O35900 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lsm2O35900 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm2O35900 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.2□□□□□ -0.46
Lsm2O35900 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.2□□□□□ -0.46
Lsm2O35900 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lsm2O35900 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Lsm2O35900 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.2□□□□□ -0.46
Lsm2O35900 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm2O35900 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lsm2O35900 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm2O35900 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.19□□□□□ -0.46
Lsm2O35900 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Lsm2O35900 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm2O35900 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Lsm2O35900 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm2O35900 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Gm15678-201ENSMUST00000117573 960 ntBASIC12.19□□□□□ -0.46
Lsm2O35900 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm2O35900 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.19□□□□□ -0.46
Lsm2O35900 Gm37714-201ENSMUST00000194742 342 ntBASIC12.19□□□□□ -0.46
Lsm2O35900 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm2O35900 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.19□□□□□ -0.46
Lsm2O35900 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Mir497b-201ENSMUST00000093601 125 ntBASIC12.19□□□□□ -0.46
Lsm2O35900 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm2O35900 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.19□□□□□ -0.46
Lsm2O35900 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm2O35900 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm2O35900 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lsm2O35900 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms