Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nr1i3O35627 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nr1i3O35627 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.76□□□□□ -0.05
Nr1i3O35627 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.76□□□□□ -0.05
Nr1i3O35627 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nr1i3O35627 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Gm3436-201ENSMUST00000179930 840 ntBASIC14.76□□□□□ -0.05
Nr1i3O35627 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nr1i3O35627 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Nr1i3O35627 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.76□□□□□ -0.05
Nr1i3O35627 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nr1i3O35627 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1i3O35627 Acot6-202ENSMUST00000222921 3622 ntBASIC14.75□□□□□ -0.05
Nr1i3O35627 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nr1i3O35627 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.75□□□□□ -0.05
Nr1i3O35627 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.75□□□□□ -0.05
Nr1i3O35627 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nr1i3O35627 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nr1i3O35627 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
Nr1i3O35627 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Nr1i3O35627 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nr1i3O35627 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Gm27680-201ENSMUST00000184192 160 ntBASIC14.74□□□□□ -0.05
Nr1i3O35627 Gm27430-201ENSMUST00000184585 107 ntBASIC14.74□□□□□ -0.05
Nr1i3O35627 Gm27321-201ENSMUST00000185021 205 ntBASIC14.74□□□□□ -0.05
Nr1i3O35627 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.74□□□□□ -0.05
Nr1i3O35627 Gm44333-201ENSMUST00000197168 107 ntBASIC14.74□□□□□ -0.05
Nr1i3O35627 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.74□□□□□ -0.05
Nr1i3O35627 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nr1i3O35627 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms