Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm8927-201ENSMUST00000181978 981 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Syt7-205ENSMUST00000224135 1557 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm9797-201ENSMUST00000052902 613 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm3222-201ENSMUST00000071282 990 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 Mir497b-201ENSMUST00000093601 125 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.91□□□□□ -0.34
Cx3cl1O35188 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gm22189-201ENSMUST00000103822 86 ntBASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.91□□□□□ -0.34
Cx3cl1O35188 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.91□□□□□ -0.34
Cx3cl1O35188 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.91□□□□□ -0.34
Cx3cl1O35188 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cx3cl1O35188 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.9□□□□□ -0.34
Cx3cl1O35188 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Gm7488-201ENSMUST00000117148 684 ntBASIC12.9□□□□□ -0.34
Cx3cl1O35188 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Gm13385-201ENSMUST00000121089 220 ntBASIC12.9□□□□□ -0.34
Cx3cl1O35188 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cx3cl1O35188 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Gm6218-201ENSMUST00000219812 628 ntBASIC12.9□□□□□ -0.34
Cx3cl1O35188 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms