Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC20.69■□□□□ 0.9
Polr1aO35134 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Polr1aO35134 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Gm17208-201ENSMUST00000168388 535 ntBASIC20.69■□□□□ 0.9
Polr1aO35134 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Polr1aO35134 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Polr1aO35134 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Polr1aO35134 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC20.69■□□□□ 0.9
Polr1aO35134 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr1aO35134 Gm6015-201ENSMUST00000217493 1586 ntBASIC20.68■□□□□ 0.9
Polr1aO35134 AC139054.1-201ENSMUST00000226898 1598 ntBASIC20.68■□□□□ 0.9
Polr1aO35134 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr1aO35134 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Polr1aO35134 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC20.68■□□□□ 0.9
Polr1aO35134 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr1aO35134 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr1aO35134 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC20.68■□□□□ 0.9
Polr1aO35134 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC20.68■□□□□ 0.9
Polr1aO35134 Gm8176-201ENSMUST00000191297 1099 ntBASIC20.68■□□□□ 0.9
Polr1aO35134 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Polr1aO35134 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr1aO35134 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr1aO35134 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Polr1aO35134 Gm44775-201ENSMUST00000207266 1456 ntBASIC20.68■□□□□ 0.9
Polr1aO35134 Gm11439-201ENSMUST00000118598 409 ntBASIC20.67■□□□□ 0.9
Polr1aO35134 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 Gm18615-201ENSMUST00000222919 1031 ntBASIC20.67■□□□□ 0.9
Polr1aO35134 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC20.67■□□□□ 0.9
Polr1aO35134 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Polr1aO35134 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC20.67■□□□□ 0.9
Polr1aO35134 Gm12715-201ENSMUST00000121430 1128 ntBASIC20.67■□□□□ 0.9
Polr1aO35134 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC20.67■□□□□ 0.9
Polr1aO35134 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr1aO35134 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Gm8228-201ENSMUST00000189949 2192 ntBASIC20.66■□□□□ 0.9
Polr1aO35134 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC20.66■□□□□ 0.9
Polr1aO35134 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
Polr1aO35134 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 AC167669.2-201ENSMUST00000224417 1620 ntBASIC20.66■□□□□ 0.9
Polr1aO35134 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Gm19221-201ENSMUST00000221827 1477 ntBASIC20.66■□□□□ 0.9
Polr1aO35134 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Polr1aO35134 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr1aO35134 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Polr1aO35134 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr1aO35134 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms